Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm18057-201ENSMUST00000208220 503 ntBASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trerf1Q8BXJ2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trerf1Q8BXJ2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trerf1Q8BXJ2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trerf1Q8BXJ2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trerf1Q8BXJ2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trerf1Q8BXJ2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trerf1Q8BXJ2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm14701-201ENSMUST00000117156 348 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm44335-201ENSMUST00000196879 141 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm44297-201ENSMUST00000198304 141 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm44346-201ENSMUST00000198851 141 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trerf1Q8BXJ2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Mir6990-201ENSMUST00000183724 91 ntBASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trerf1Q8BXJ2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms