Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Usp43Q8BUM9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Shd-206ENSMUST00000225145 998 ntBASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp43Q8BUM9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Gm27533-201ENSMUST00000183800 152 ntBASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp43Q8BUM9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Mir1897-201ENSMUST00000122581 272 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm25144-201ENSMUST00000179561 110 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm25352-201ENSMUST00000179815 110 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Gm6916-202ENSMUST00000205523 195 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp43Q8BUM9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms