Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Gm15321-201ENSMUST00000121290 288 ntBASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Gm8584-201ENSMUST00000171982 758 ntBASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Gm24694-201ENSMUST00000180054 110 ntBASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Gm27663-201ENSMUST00000184839 110 ntBASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Mir6977-201ENSMUST00000184960 64 ntBASIC14.46□□□□□ -0.09
Nup54Q8BTS4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup54Q8BTS4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup54Q8BTS4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Gm9522-201ENSMUST00000182394 926 ntBASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Gm10766-202ENSMUST00000194123 606 ntBASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nup54Q8BTS4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm4804-201ENSMUST00000182234 999 ntBASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm27437-201ENSMUST00000183429 107 ntBASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm20445-201ENSMUST00000061905 565 ntBASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup54Q8BTS4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms