Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm38158-201ENSMUST00000194617 339 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm11658-201ENSMUST00000120913 1008 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm2467-201ENSMUST00000182266 1010 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm6981-201ENSMUST00000182467 1008 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm44364-201ENSMUST00000198368 141 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm4935-201ENSMUST00000221316 1198 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Gm10268-201ENSMUST00000085340 555 ntBASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col16a1Q8BLX7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Col16a1Q8BLX7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gm16570-201ENSMUST00000161951 436 ntBASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gm37922-201ENSMUST00000195596 455 ntBASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gm26315-201ENSMUST00000083890 321 ntBASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col16a1Q8BLX7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Gm9368-201ENSMUST00000219348 831 ntBASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.19■□□□□ 0.5
Col16a1Q8BLX7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gm13369-201ENSMUST00000119442 987 ntBASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Gm7993-201ENSMUST00000200970 1384 ntBASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Col16a1Q8BLX7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms