Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp2bQ8BJF9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Gm7461-201ENSMUST00000058918 827 ntBASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp2bQ8BJF9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp2bQ8BJF9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp2bQ8BJF9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms