Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.41□□□□□ -0.1
Nrde2Q80XC6 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Gm9797-201ENSMUST00000052902 613 ntBASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nrde2Q80XC6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nrde2Q80XC6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nrde2Q80XC6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nrde2Q80XC6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Mir6392-201ENSMUST00000184924 108 ntBASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.38□□□□□ -0.11
Nrde2Q80XC6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms