Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf40bQ80W14 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Gm27631-201ENSMUST00000184163 466 ntBASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.3■□□□□ 0.2
Prpf40bQ80W14 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf40bQ80W14 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gm6222-201ENSMUST00000120787 396 ntBASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gm9229-201ENSMUST00000222777 126 ntBASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prpf40bQ80W14 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm29310-201ENSMUST00000185468 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21825-201ENSMUST00000185728 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm29109-201ENSMUST00000185895 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21896-201ENSMUST00000186520 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21873-201ENSMUST00000186728 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21794-201ENSMUST00000187056 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21880-201ENSMUST00000187275 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21826-201ENSMUST00000187451 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21198-201ENSMUST00000188393 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21749-201ENSMUST00000189343 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21901-201ENSMUST00000189568 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm29424-201ENSMUST00000189716 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm28599-201ENSMUST00000189838 694 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21867-201ENSMUST00000189917 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm29269-201ENSMUST00000190087 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21722-201ENSMUST00000190153 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm28423-201ENSMUST00000190701 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21899-201ENSMUST00000190745 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21910-201ENSMUST00000191163 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21849-201ENSMUST00000191571 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm28678-201ENSMUST00000191593 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm20910-201ENSMUST00000193268 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm21871-201ENSMUST00000194621 696 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Gm19220-201ENSMUST00000222682 803 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prpf40bQ80W14 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms