Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Gm37230-201ENSMUST00000194491 818 ntBASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3tc2Q80VA5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gm15678-201ENSMUST00000117573 960 ntBASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gm28911-201ENSMUST00000188837 117 ntBASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Gm9182-201ENSMUST00000217829 639 ntBASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3tc2Q80VA5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Gm27701-201ENSMUST00000184498 110 ntBASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Gm33320-201ENSMUST00000192232 530 ntBASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sh3tc2Q80VA5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sh3tc2Q80VA5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms