Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.61□□□□□ -0.07
Trim62Q80V85 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim62Q80V85 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.61□□□□□ -0.07
Trim62Q80V85 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Gm4875-201ENSMUST00000118257 786 ntBASIC14.61□□□□□ -0.07
Trim62Q80V85 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim62Q80V85 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.61□□□□□ -0.07
Trim62Q80V85 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim62Q80V85 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim62Q80V85 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim62Q80V85 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim62Q80V85 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.59□□□□□ -0.07
Trim62Q80V85 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim62Q80V85 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Gm12151-201ENSMUST00000121374 290 ntBASIC14.59□□□□□ -0.07
Trim62Q80V85 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Gm10766-202ENSMUST00000194123 606 ntBASIC14.59□□□□□ -0.07
Trim62Q80V85 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.59□□□□□ -0.07
Trim62Q80V85 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms