Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh19Q80TF3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gm28760-201ENSMUST00000185995 736 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gm21470-201ENSMUST00000187680 696 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gm28631-201ENSMUST00000190740 334 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gm9797-201ENSMUST00000052902 613 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh19Q80TF3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Gm11424-201ENSMUST00000121929 829 ntBASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh19Q80TF3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh19Q80TF3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms