Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.51□□□□□ -0.57
Vma21Q78T54 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Vma21Q78T54 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Vma21Q78T54 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Gm14140-201ENSMUST00000119999 995 ntBASIC11.51□□□□□ -0.57
Vma21Q78T54 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.51□□□□□ -0.57
Vma21Q78T54 Gm10275-202ENSMUST00000168697 495 ntBASIC11.51□□□□□ -0.57
Vma21Q78T54 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vma21Q78T54 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.51□□□□□ -0.57
Vma21Q78T54 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Gm10275-201ENSMUST00000092620 635 ntBASIC11.51□□□□□ -0.57
Vma21Q78T54 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.51□□□□□ -0.57
Vma21Q78T54 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vma21Q78T54 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.51□□□□□ -0.57
Vma21Q78T54 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vma21Q78T54 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Vma21Q78T54 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.5□□□□□ -0.57
Vma21Q78T54 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.5□□□□□ -0.57
Vma21Q78T54 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.5□□□□□ -0.57
Vma21Q78T54 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.5□□□□□ -0.57
Vma21Q78T54 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Vma21Q78T54 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vma21Q78T54 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms