Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Gm17807-201ENSMUST00000186869 298 ntBASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf220Q6PDX6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf220Q6PDX6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf220Q6PDX6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf220Q6PDX6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Grk6-207ENSMUST00000225925 2769 ntBASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf220Q6PDX6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm27646-201ENSMUST00000183989 110 ntBASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm18669-201ENSMUST00000216049 778 ntBASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf220Q6PDX6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms