Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ShbQ6PD21 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
ShbQ6PD21 Gm13123-201ENSMUST00000122173 492 ntBASIC15.06■□□□□ 0
ShbQ6PD21 B9d1os-201ENSMUST00000137010 674 ntBASIC15.06■□□□□ 0
ShbQ6PD21 Gm24990-201ENSMUST00000157406 323 ntBASIC15.06■□□□□ 0
ShbQ6PD21 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.06■□□□□ 0
ShbQ6PD21 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ShbQ6PD21 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ShbQ6PD21 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.06■□□□□ 0
ShbQ6PD21 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.06■□□□□ 0
ShbQ6PD21 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.06■□□□□ 0
ShbQ6PD21 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
ShbQ6PD21 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ShbQ6PD21 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.06■□□□□ 0
ShbQ6PD21 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.06■□□□□ 0
ShbQ6PD21 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.05■□□□□ 0
ShbQ6PD21 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
ShbQ6PD21 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
ShbQ6PD21 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ShbQ6PD21 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.05■□□□□ 0
ShbQ6PD21 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
ShbQ6PD21 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ShbQ6PD21 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.05■□□□□ -0
ShbQ6PD21 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
ShbQ6PD21 Gm7809-201ENSMUST00000153199 742 ntBASIC15.05■□□□□ -0
ShbQ6PD21 Gm24514-201ENSMUST00000174961 285 ntBASIC15.05■□□□□ -0
ShbQ6PD21 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.05■□□□□ -0
ShbQ6PD21 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
ShbQ6PD21 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ShbQ6PD21 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.05■□□□□ -0
ShbQ6PD21 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ShbQ6PD21 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.05■□□□□ -0
ShbQ6PD21 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
ShbQ6PD21 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.04■□□□□ -0
ShbQ6PD21 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Gm12403-201ENSMUST00000121384 959 ntBASIC15.04■□□□□ -0
ShbQ6PD21 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.04■□□□□ -0
ShbQ6PD21 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
ShbQ6PD21 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.04■□□□□ -0
ShbQ6PD21 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.04■□□□□ -0
ShbQ6PD21 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.04■□□□□ -0
ShbQ6PD21 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ShbQ6PD21 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
ShbQ6PD21 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ShbQ6PD21 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShbQ6PD21 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
ShbQ6PD21 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms