Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzrn3Q69ZS0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gm15824-201ENSMUST00000119516 955 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gm15806-201ENSMUST00000120696 955 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gm33320-201ENSMUST00000192232 530 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzrn3Q69ZS0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Gm15393-201ENSMUST00000120499 219 ntBASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pdzrn3Q69ZS0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Gm9002-201ENSMUST00000178437 499 ntBASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.29■□□□□ 0.36
Pdzrn3Q69ZS0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdzrn3Q69ZS0 Gm17150-201ENSMUST00000165577 381 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms