Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sdc3Q64519 Gm14767-201ENSMUST00000121559 586 ntBASIC13.62□□□□□ -0.23
Sdc3Q64519 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Sdc3Q64519 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.62□□□□□ -0.23
Sdc3Q64519 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.62□□□□□ -0.23
Sdc3Q64519 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.62□□□□□ -0.23
Sdc3Q64519 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.62□□□□□ -0.23
Sdc3Q64519 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Dupd1-202ENSMUST00000224735 548 ntBASIC13.62□□□□□ -0.23
Sdc3Q64519 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sdc3Q64519 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sdc3Q64519 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Gm9063-201ENSMUST00000223299 582 ntBASIC13.61□□□□□ -0.23
Sdc3Q64519 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sdc3Q64519 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.61□□□□□ -0.23
Sdc3Q64519 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sdc3Q64519 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Gm27306-201ENSMUST00000183970 107 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.6□□□□□ -0.23
Sdc3Q64519 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Gm46209-201ENSMUST00000217912 553 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.6□□□□□ -0.23
Sdc3Q64519 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sdc3Q64519 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sdc3Q64519 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms