Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Clcn1Q64347 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn1Q64347 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.86■□□□□ 0.45
Clcn1Q64347 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Gm12390-201ENSMUST00000117897 397 ntBASIC17.86■□□□□ 0.45
Clcn1Q64347 Gm15957-201ENSMUST00000118893 974 ntBASIC17.86■□□□□ 0.45
Clcn1Q64347 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clcn1Q64347 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.86■□□□□ 0.45
Clcn1Q64347 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clcn1Q64347 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn1Q64347 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.85■□□□□ 0.45
Clcn1Q64347 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Clcn1Q64347 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Gm6244-201ENSMUST00000178732 841 ntBASIC17.85■□□□□ 0.45
Clcn1Q64347 Gm27839-201ENSMUST00000184242 106 ntBASIC17.85■□□□□ 0.45
Clcn1Q64347 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.85■□□□□ 0.45
Clcn1Q64347 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clcn1Q64347 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.85■□□□□ 0.45
Clcn1Q64347 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn1Q64347 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn1Q64347 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn1Q64347 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clcn1Q64347 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Gm4984-201ENSMUST00000115987 360 ntBASIC17.84■□□□□ 0.45
Clcn1Q64347 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Mir1938-201ENSMUST00000158746 100 ntBASIC17.84■□□□□ 0.45
Clcn1Q64347 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clcn1Q64347 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clcn1Q64347 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn1Q64347 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn1Q64347 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Clcn1Q64347 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.83■□□□□ 0.45
Clcn1Q64347 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.83■□□□□ 0.45
Clcn1Q64347 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn1Q64347 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn1Q64347 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn1Q64347 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.83■□□□□ 0.44
Clcn1Q64347 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.83■□□□□ 0.44
Clcn1Q64347 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.83■□□□□ 0.44
Clcn1Q64347 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Gm5356-201ENSMUST00000093326 615 ntBASIC17.83■□□□□ 0.44
Clcn1Q64347 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn1Q64347 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms