Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Gm37922-201ENSMUST00000195596 455 ntBASIC16.32■□□□□ 0.2
Scn9aQ62205 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.32■□□□□ 0.2
Scn9aQ62205 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.32■□□□□ 0.2
Scn9aQ62205 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.32■□□□□ 0.2
Scn9aQ62205 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn9aQ62205 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn9aQ62205 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Scn9aQ62205 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm12403-201ENSMUST00000121384 959 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm10146-201ENSMUST00000072739 309 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Scn9aQ62205 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn9aQ62205 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm24255-201ENSMUST00000104481 128 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm5363-201ENSMUST00000211927 938 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Gm7046-201ENSMUST00000221351 977 ntBASIC16.31■□□□□ 0.2
Scn9aQ62205 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn9aQ62205 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn9aQ62205 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn9aQ62205 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn9aQ62205 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.3■□□□□ 0.2
Scn9aQ62205 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn9aQ62205 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn9aQ62205 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Gm6082-201ENSMUST00000215204 454 ntBASIC16.3■□□□□ 0.2
Scn9aQ62205 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.3■□□□□ 0.2
Scn9aQ62205 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scn9aQ62205 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.3■□□□□ 0.2
Scn9aQ62205 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn9aQ62205 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms