Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcanQ62059 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VcanQ62059 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Gm5049-201ENSMUST00000195878 1590 ntBASIC13□□□□□ -0.33
VcanQ62059 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Gm12203-201ENSMUST00000118235 598 ntBASIC13□□□□□ -0.33
VcanQ62059 Gm12209-201ENSMUST00000120089 596 ntBASIC13□□□□□ -0.33
VcanQ62059 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13□□□□□ -0.33
VcanQ62059 Gm12485-201ENSMUST00000119641 291 ntBASIC13□□□□□ -0.33
VcanQ62059 Gm11964-201ENSMUST00000120982 444 ntBASIC13□□□□□ -0.33
VcanQ62059 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13□□□□□ -0.33
VcanQ62059 Morn2-202ENSMUST00000227729 656 ntBASIC13□□□□□ -0.33
VcanQ62059 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Gm16379-201ENSMUST00000161469 348 ntBASIC13□□□□□ -0.33
VcanQ62059 Gm8762-201ENSMUST00000193486 339 ntBASIC13□□□□□ -0.33
VcanQ62059 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VcanQ62059 AC169036.1-201ENSMUST00000227994 296 ntBASIC13□□□□□ -0.33
VcanQ62059 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13□□□□□ -0.33
VcanQ62059 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcanQ62059 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VcanQ62059 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.99□□□□□ -0.33
VcanQ62059 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
VcanQ62059 Gm15371-201ENSMUST00000117057 784 ntBASIC12.99□□□□□ -0.33
VcanQ62059 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.99□□□□□ -0.33
VcanQ62059 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VcanQ62059 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.99□□□□□ -0.33
VcanQ62059 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.99□□□□□ -0.33
VcanQ62059 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.99□□□□□ -0.33
VcanQ62059 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VcanQ62059 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.99□□□□□ -0.33
VcanQ62059 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VcanQ62059 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VcanQ62059 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VcanQ62059 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VcanQ62059 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VcanQ62059 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
VcanQ62059 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Gm11222-201ENSMUST00000119005 738 ntBASIC12.98□□□□□ -0.33
VcanQ62059 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.98□□□□□ -0.33
VcanQ62059 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.98□□□□□ -0.33
VcanQ62059 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.98□□□□□ -0.33
VcanQ62059 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VcanQ62059 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms