Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Gm18018-201ENSMUST00000198273 408 ntBASIC10.9□□□□□ -0.66
Notch3Q61982 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Notch3Q61982 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Notch3Q61982 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Notch3Q61982 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Notch3Q61982 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Notch3Q61982 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Notch3Q61982 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.9□□□□□ -0.67
Notch3Q61982 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.9□□□□□ -0.67
Notch3Q61982 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.9□□□□□ -0.67
Notch3Q61982 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.9□□□□□ -0.67
Notch3Q61982 Gm6745-201ENSMUST00000199216 526 ntBASIC10.9□□□□□ -0.67
Notch3Q61982 Gm45668-201ENSMUST00000211271 493 ntBASIC10.9□□□□□ -0.67
Notch3Q61982 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Notch3Q61982 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Notch3Q61982 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Notch3Q61982 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Notch3Q61982 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Notch3Q61982 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Notch3Q61982 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Notch3Q61982 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Mir1897-201ENSMUST00000122581 272 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.89□□□□□ -0.67
Notch3Q61982 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.89□□□□□ -0.67
Notch3Q61982 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Gm13829-201ENSMUST00000119600 138 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Notch3Q61982 Mir1938-201ENSMUST00000158746 100 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Gm21854-201ENSMUST00000179901 471 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Gm6266-201ENSMUST00000203844 806 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 Gm16476-201ENSMUST00000221544 139 ntBASIC10.89□□□□□ -0.67
Notch3Q61982 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Notch3Q61982 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.88□□□□□ -0.67
Notch3Q61982 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.88□□□□□ -0.67
Notch3Q61982 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Notch3Q61982 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Notch3Q61982 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Notch3Q61982 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Notch3Q61982 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Notch3Q61982 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms