Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pabpn1lQ5XFR0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Gm8584-201ENSMUST00000171982 758 ntBASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pabpn1lQ5XFR0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pabpn1lQ5XFR0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pabpn1lQ5XFR0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.13□□□□□ -0.15
Pabpn1lQ5XFR0 Gm8749-201ENSMUST00000117737 331 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms