Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm33142-201ENSMUST00000193913 867 ntBASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ankra2-208ENSMUST00000226100 1476 ntBASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm14371-201ENSMUST00000138925 1518 ntBASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Grk6-205ENSMUST00000224653 2976 ntBASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm43935-201ENSMUST00000203569 1050 ntBASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm45747-201ENSMUST00000212203 999 ntBASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Il17rd-203ENSMUST00000225146 3366 ntBASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm2272-201ENSMUST00000194903 582 ntBASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm45167-201ENSMUST00000208007 322 ntBASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav15-1-dv6-1Q5R1D2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms