Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps13aQ5H8C4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps13aQ5H8C4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Vps13aQ5H8C4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.72□□□□□ -0.21
Vps13aQ5H8C4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.72□□□□□ -0.21
Vps13aQ5H8C4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Gm27772-201ENSMUST00000184900 187 ntBASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps13aQ5H8C4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Gm12208-201ENSMUST00000122004 163 ntBASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Gm13570-201ENSMUST00000140763 309 ntBASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Gm37922-201ENSMUST00000195596 455 ntBASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps13aQ5H8C4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm7857-201ENSMUST00000117957 358 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm15957-201ENSMUST00000118893 974 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm13123-201ENSMUST00000122173 492 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm18212-201ENSMUST00000211678 889 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps13aQ5H8C4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm12217-201ENSMUST00000118858 696 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm12882-201ENSMUST00000121696 517 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm16379-201ENSMUST00000161469 348 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm8762-201ENSMUST00000193486 339 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm44100-201ENSMUST00000204329 436 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms