Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf20Q5DTM8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Gm9719-201ENSMUST00000162765 543 ntBASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 AA543401-201ENSMUST00000164248 1269 ntBASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Gm29541-201ENSMUST00000191351 678 ntBASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Rnf20Q5DTM8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf20Q5DTM8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Rnf20Q5DTM8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Rnf20Q5DTM8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf20Q5DTM8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf20Q5DTM8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Gm7774-201ENSMUST00000200064 533 ntBASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf20Q5DTM8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms