Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Gm27920-201ENSMUST00000183953 96 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.98□□□□□ -0.17
Scn2bQ56A07 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Scn2bQ56A07 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.97□□□□□ -0.17
Scn2bQ56A07 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn2bQ56A07 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.96□□□□□ -0.17
Scn2bQ56A07 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Rprl2-201ENSMUST00000157150 290 ntBASIC13.96□□□□□ -0.17
Scn2bQ56A07 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Gm8584-201ENSMUST00000171982 758 ntBASIC13.96□□□□□ -0.17
Scn2bQ56A07 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.96□□□□□ -0.17
Scn2bQ56A07 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.96□□□□□ -0.17
Scn2bQ56A07 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.96□□□□□ -0.17
Scn2bQ56A07 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn2bQ56A07 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn2bQ56A07 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn2bQ56A07 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms