Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Gm6973-201ENSMUST00000117080 721 ntBASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trafd1Q3UDK1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Gm15427-201ENSMUST00000117288 531 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Auts2-212ENSMUST00000178555 309 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Gm44608-201ENSMUST00000206827 855 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trafd1Q3UDK1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Gm18737-201ENSMUST00000173594 937 ntBASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trafd1Q3UDK1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Matn2-206ENSMUST00000228570 2798 ntBASIC14.05□□□□□ -0.16
Trafd1Q3UDK1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms