Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm29608-201ENSMUST00000190444 463 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm6621-201ENSMUST00000193251 772 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm37922-201ENSMUST00000195596 455 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm7046-201ENSMUST00000221351 977 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.54■□□□□ 0.24
Col5a2Q3U962 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col5a2Q3U962 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.53■□□□□ 0.24
Col5a2Q3U962 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Gm12997-201ENSMUST00000120207 640 ntBASIC16.53■□□□□ 0.24
Col5a2Q3U962 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Gm42550-201ENSMUST00000201553 960 ntBASIC16.53■□□□□ 0.24
Col5a2Q3U962 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.53■□□□□ 0.24
Col5a2Q3U962 Gm21769-201ENSMUST00000211922 111 ntBASIC16.53■□□□□ 0.24
Col5a2Q3U962 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Gm10268-201ENSMUST00000085340 555 ntBASIC16.53■□□□□ 0.24
Col5a2Q3U962 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col5a2Q3U962 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col5a2Q3U962 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Gm2383-201ENSMUST00000181461 807 ntBASIC16.52■□□□□ 0.23
Col5a2Q3U962 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.52■□□□□ 0.23
Col5a2Q3U962 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.52■□□□□ 0.23
Col5a2Q3U962 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col5a2Q3U962 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.51■□□□□ 0.23
Col5a2Q3U962 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.51■□□□□ 0.23
Col5a2Q3U962 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms