Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm29608-201ENSMUST00000190444 463 ntBASIC16.33■□□□□ 0.2
Rnf180Q3U827 Gm8285-201ENSMUST00000208293 759 ntBASIC16.33■□□□□ 0.2
Rnf180Q3U827 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf180Q3U827 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm23699-201ENSMUST00000158835 135 ntBASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm5778-201ENSMUST00000171003 1072 ntBASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.32■□□□□ 0.2
Rnf180Q3U827 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm4607-201ENSMUST00000206649 577 ntBASIC16.32■□□□□ 0.2
Rnf180Q3U827 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.32■□□□□ 0.2
Rnf180Q3U827 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Gm10179-201ENSMUST00000086233 688 ntBASIC16.32■□□□□ 0.2
Rnf180Q3U827 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf180Q3U827 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rnf180Q3U827 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.31■□□□□ 0.2
Rnf180Q3U827 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Gm12795-201ENSMUST00000117594 539 ntBASIC16.31■□□□□ 0.2
Rnf180Q3U827 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.31■□□□□ 0.2
Rnf180Q3U827 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Gm27046-201ENSMUST00000182160 463 ntBASIC16.31■□□□□ 0.2
Rnf180Q3U827 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf180Q3U827 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Gm13888-201ENSMUST00000119148 422 ntBASIC16.3■□□□□ 0.2
Rnf180Q3U827 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Gm19163-201ENSMUST00000223313 780 ntBASIC16.3■□□□□ 0.2
Rnf180Q3U827 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf180Q3U827 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms