Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Q3U1D9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Q3U1D9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q3U1D9 Efs-202ENSMUST00000227037 2540 ntBASIC12.27□□□□□ -0.45
Q3U1D9 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.26□□□□□ -0.45
Q3U1D9 Carlr-201ENSMUST00000181515 2574 ntBASIC12.26□□□□□ -0.45
Q3U1D9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Q3U1D9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Q3U1D9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.26□□□□□ -0.45
Q3U1D9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.26□□□□□ -0.45
Q3U1D9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Q3U1D9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.26□□□□□ -0.45
Q3U1D9 Gm37714-201ENSMUST00000194742 342 ntBASIC12.26□□□□□ -0.45
Q3U1D9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.26□□□□□ -0.45
Q3U1D9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Gm18027-201ENSMUST00000218947 619 ntBASIC12.26□□□□□ -0.45
Q3U1D9 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.26□□□□□ -0.45
Q3U1D9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Q3U1D9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q3U1D9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Q3U1D9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.25□□□□□ -0.45
Q3U1D9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Q3U1D9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Q3U1D9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.25□□□□□ -0.45
Q3U1D9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Q3U1D9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.25□□□□□ -0.45
Q3U1D9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.25□□□□□ -0.45
Q3U1D9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.25□□□□□ -0.45
Q3U1D9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.25□□□□□ -0.45
Q3U1D9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Q3U1D9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.25□□□□□ -0.45
Q3U1D9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Q3U1D9 Gm6745-201ENSMUST00000199216 526 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms