Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm5049-201ENSMUST00000195878 1590 ntBASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm12539-201ENSMUST00000121549 1098 ntBASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm40879-201ENSMUST00000220759 612 ntBASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm23949-201ENSMUST00000104027 127 ntBASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm25998-201ENSMUST00000175397 53 ntBASIC7.3□□□□□ -1.24
Ush2AQ2QI47 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 AC161537.1-201ENSMUST00000226199 1015 ntBASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ush2AQ2QI47 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ntrk2-205ENSMUST00000224402 2284 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm44069-201ENSMUST00000204898 506 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 AC171241.1-201ENSMUST00000228144 1166 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm8242-201ENSMUST00000193029 1420 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 AC134537.1-201ENSMUST00000219205 265 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm18974-201ENSMUST00000221478 1031 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm43423-201ENSMUST00000198390 2094 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms