Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Tff1Q08423 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.77□□□□□ -0.52
Tff1Q08423 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Tff1Q08423 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tff1Q08423 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.77□□□□□ -0.53
Tff1Q08423 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.77□□□□□ -0.53
Tff1Q08423 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Gm5312-201ENSMUST00000203728 547 ntBASIC11.77□□□□□ -0.53
Tff1Q08423 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.77□□□□□ -0.53
Tff1Q08423 Gm10154-201ENSMUST00000084445 354 ntBASIC11.77□□□□□ -0.53
Tff1Q08423 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.77□□□□□ -0.53
Tff1Q08423 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tff1Q08423 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tff1Q08423 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
Tff1Q08423 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Tff1Q08423 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.76□□□□□ -0.53
Tff1Q08423 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.76□□□□□ -0.53
Tff1Q08423 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.76□□□□□ -0.53
Tff1Q08423 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tff1Q08423 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Tff1Q08423 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.76□□□□□ -0.53
Tff1Q08423 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tff1Q08423 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm16198-201ENSMUST00000118766 670 ntBASIC11.75□□□□□ -0.53
Tff1Q08423 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms