Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Thumpd3P97770 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Thumpd3P97770 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.41□□□□□ -0.1
Thumpd3P97770 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Thumpd3P97770 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.41□□□□□ -0.1
Thumpd3P97770 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.41□□□□□ -0.1
Thumpd3P97770 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Thumpd3P97770 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Thumpd3P97770 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd3P97770 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.4□□□□□ -0.1
Thumpd3P97770 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Thumpd3P97770 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd3P97770 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm8396-201ENSMUST00000057361 823 ntBASIC14.39□□□□□ -0.11
Thumpd3P97770 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Thumpd3P97770 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd3P97770 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.39□□□□□ -0.11
Thumpd3P97770 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Thumpd3P97770 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.38□□□□□ -0.11
Thumpd3P97770 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Gm15920-201ENSMUST00000118998 402 ntBASIC14.38□□□□□ -0.11
Thumpd3P97770 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.38□□□□□ -0.11
Thumpd3P97770 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.38□□□□□ -0.11
Thumpd3P97770 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms