Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.62□□□□□ -0.39
SgcbP82349 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SgcbP82349 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.62□□□□□ -0.39
SgcbP82349 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.61□□□□□ -0.39
SgcbP82349 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.61□□□□□ -0.39
SgcbP82349 Gm12134-201ENSMUST00000122109 520 ntBASIC12.61□□□□□ -0.39
SgcbP82349 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.61□□□□□ -0.39
SgcbP82349 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.61□□□□□ -0.39
SgcbP82349 Gm27989-201ENSMUST00000184721 107 ntBASIC12.61□□□□□ -0.39
SgcbP82349 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.61□□□□□ -0.39
SgcbP82349 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.61□□□□□ -0.39
SgcbP82349 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SgcbP82349 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SgcbP82349 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SgcbP82349 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SgcbP82349 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SgcbP82349 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SgcbP82349 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.6□□□□□ -0.39
SgcbP82349 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Gm15957-201ENSMUST00000118893 974 ntBASIC12.6□□□□□ -0.39
SgcbP82349 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SgcbP82349 Gm23547-201ENSMUST00000158210 271 ntBASIC12.6□□□□□ -0.39
SgcbP82349 Mir8102-201ENSMUST00000184148 139 ntBASIC12.6□□□□□ -0.39
SgcbP82349 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SgcbP82349 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.6□□□□□ -0.39
SgcbP82349 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.6□□□□□ -0.39
SgcbP82349 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.6□□□□□ -0.39
SgcbP82349 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 BC001981-202ENSMUST00000191393 1545 ntBASIC12.6□□□□□ -0.39
SgcbP82349 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SgcbP82349 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SgcbP82349 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SgcbP82349 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms