Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm11779-201ENSMUST00000118541 368 ntBASIC15.56■□□□□ 0.08
Hmgb1P63158 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm44608-201ENSMUST00000206827 855 ntBASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.56■□□□□ 0.08
Hmgb1P63158 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Hmgb1P63158 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hmgb1P63158 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 AC123738.2-201ENSMUST00000223791 1899 ntBASIC15.55■□□□□ 0.08
Hmgb1P63158 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Rprl2-201ENSMUST00000157150 290 ntBASIC15.55■□□□□ 0.08
Hmgb1P63158 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.55■□□□□ 0.08
Hmgb1P63158 Gm10175-201ENSMUST00000086013 645 ntBASIC15.55■□□□□ 0.08
Hmgb1P63158 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hmgb1P63158 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgb1P63158 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.54■□□□□ 0.08
Hmgb1P63158 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.54■□□□□ 0.08
Hmgb1P63158 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmgb1P63158 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.54■□□□□ 0.08
Hmgb1P63158 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.54■□□□□ 0.08
Hmgb1P63158 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.54■□□□□ 0.08
Hmgb1P63158 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmgb1P63158 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmgb1P63158 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmgb1P63158 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.54■□□□□ 0.08
Hmgb1P63158 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Hmgb1P63158 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgb1P63158 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgb1P63158 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgb1P63158 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgb1P63158 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.53■□□□□ 0.08
Hmgb1P63158 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms