Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rbx1P62878 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rbx1P62878 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rbx1P62878 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.47□□□□□ -0.73
Rbx1P62878 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.47□□□□□ -0.73
Rbx1P62878 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Rbx1P62878 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rbx1P62878 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rbx1P62878 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.46□□□□□ -0.73
Rbx1P62878 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rbx1P62878 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rbx1P62878 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.46□□□□□ -0.73
Rbx1P62878 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.46□□□□□ -0.73
Rbx1P62878 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.46□□□□□ -0.73
Rbx1P62878 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rbx1P62878 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Rbx1P62878 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rbx1P62878 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Rbx1P62878 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.45□□□□□ -0.74
Rbx1P62878 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.45□□□□□ -0.74
Rbx1P62878 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Rbx1P62878 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Rbx1P62878 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.45□□□□□ -0.74
Rbx1P62878 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Gm8318-201ENSMUST00000182954 872 ntBASIC10.45□□□□□ -0.74
Rbx1P62878 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.45□□□□□ -0.74
Rbx1P62878 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Rbx1P62878 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Rbx1P62878 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.44□□□□□ -0.74
Rbx1P62878 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Rbx1P62878 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms