Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.81□□□□□ -0.36
Vbp1P61759 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.81□□□□□ -0.36
Vbp1P61759 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vbp1P61759 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Vbp1P61759 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vbp1P61759 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vbp1P61759 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vbp1P61759 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Vbp1P61759 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.8□□□□□ -0.36
Vbp1P61759 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.8□□□□□ -0.36
Vbp1P61759 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vbp1P61759 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Vbp1P61759 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vbp1P61759 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.79□□□□□ -0.36
Vbp1P61759 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.79□□□□□ -0.36
Vbp1P61759 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Gm10013-201ENSMUST00000106074 672 ntBASIC12.79□□□□□ -0.36
Vbp1P61759 Gm15165-201ENSMUST00000118140 502 ntBASIC12.79□□□□□ -0.36
Vbp1P61759 Gm13464-201ENSMUST00000119418 935 ntBASIC12.79□□□□□ -0.36
Vbp1P61759 Gm11950-201ENSMUST00000121615 838 ntBASIC12.79□□□□□ -0.36
Vbp1P61759 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vbp1P61759 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vbp1P61759 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vbp1P61759 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms