Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Gm43767-201ENSMUST00000198933 381 ntBASIC12.48□□□□□ -0.41
Sec61a1P61620 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.48□□□□□ -0.41
Sec61a1P61620 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.48□□□□□ -0.41
Sec61a1P61620 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sec61a1P61620 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sec61a1P61620 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sec61a1P61620 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.47□□□□□ -0.41
Sec61a1P61620 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Gm15427-201ENSMUST00000117288 531 ntBASIC12.47□□□□□ -0.41
Sec61a1P61620 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.47□□□□□ -0.41
Sec61a1P61620 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.47□□□□□ -0.41
Sec61a1P61620 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.47□□□□□ -0.41
Sec61a1P61620 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sec61a1P61620 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sec61a1P61620 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.46□□□□□ -0.41
Sec61a1P61620 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sec61a1P61620 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Sec61a1P61620 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms