Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.12□□□□□ -0.79
Cks1bP61025 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Cks1bP61025 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.11□□□□□ -0.79
Cks1bP61025 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.11□□□□□ -0.79
Cks1bP61025 Gm15165-201ENSMUST00000118140 502 ntBASIC10.11□□□□□ -0.79
Cks1bP61025 Gm15794-201ENSMUST00000120182 631 ntBASIC10.11□□□□□ -0.79
Cks1bP61025 Gm12497-201ENSMUST00000138778 237 ntBASIC10.11□□□□□ -0.79
Cks1bP61025 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.11□□□□□ -0.79
Cks1bP61025 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.11□□□□□ -0.79
Cks1bP61025 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.11□□□□□ -0.79
Cks1bP61025 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Cks1bP61025 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cks1bP61025 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cks1bP61025 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Map1b-203ENSMUST00000223725 2669 ntBASIC10.1□□□□□ -0.79
Cks1bP61025 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cks1bP61025 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.1□□□□□ -0.79
Cks1bP61025 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms