Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Tpm1P58771 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.79■□□□□ 0.12
Tpm1P58771 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm1P58771 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Tpm1P58771 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.78■□□□□ 0.12
Tpm1P58771 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.78■□□□□ 0.12
Tpm1P58771 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.78■□□□□ 0.12
Tpm1P58771 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.78■□□□□ 0.12
Tpm1P58771 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.78■□□□□ 0.12
Tpm1P58771 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tpm1P58771 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.78■□□□□ 0.12
Tpm1P58771 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm1P58771 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Tpm1P58771 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.77■□□□□ 0.12
Tpm1P58771 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.77■□□□□ 0.12
Tpm1P58771 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Tpm1P58771 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.77■□□□□ 0.12
Tpm1P58771 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.77■□□□□ 0.12
Tpm1P58771 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Tpm1P58771 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Tpm1P58771 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.77■□□□□ 0.12
Tpm1P58771 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.77■□□□□ 0.12
Tpm1P58771 Birc2-201ENSMUST00000054878 378 ntBASIC15.77■□□□□ 0.12
Tpm1P58771 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tpm1P58771 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.77■□□□□ 0.11
Tpm1P58771 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
Tpm1P58771 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.77■□□□□ 0.11
Tpm1P58771 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.77■□□□□ 0.11
Tpm1P58771 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tpm1P58771 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.76■□□□□ 0.11
Tpm1P58771 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.76■□□□□ 0.11
Tpm1P58771 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.76■□□□□ 0.11
Tpm1P58771 Gm27459-201ENSMUST00000184860 107 ntBASIC15.76■□□□□ 0.11
Tpm1P58771 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.76■□□□□ 0.11
Tpm1P58771 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.76■□□□□ 0.11
Tpm1P58771 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms