Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Shmt1P50431 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Shmt1P50431 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Gm12585-201ENSMUST00000117307 290 ntBASIC14.93□□□□□ -0.02
Shmt1P50431 Gm15393-201ENSMUST00000120499 219 ntBASIC14.93□□□□□ -0.02
Shmt1P50431 Gm11424-201ENSMUST00000121929 829 ntBASIC14.93□□□□□ -0.02
Shmt1P50431 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.93□□□□□ -0.02
Shmt1P50431 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Shmt1P50431 Gm37714-201ENSMUST00000194742 342 ntBASIC14.93□□□□□ -0.02
Shmt1P50431 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.93□□□□□ -0.02
Shmt1P50431 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.93□□□□□ -0.02
Shmt1P50431 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Syt7-205ENSMUST00000224135 1557 ntBASIC14.93□□□□□ -0.02
Shmt1P50431 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shmt1P50431 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shmt1P50431 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Shmt1P50431 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.92□□□□□ -0.02
Shmt1P50431 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.92□□□□□ -0.02
Shmt1P50431 Gm21470-201ENSMUST00000187680 696 ntBASIC14.92□□□□□ -0.02
Shmt1P50431 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.92□□□□□ -0.02
Shmt1P50431 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.92□□□□□ -0.02
Shmt1P50431 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shmt1P50431 Gm6218-201ENSMUST00000219812 628 ntBASIC14.92□□□□□ -0.02
Shmt1P50431 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Shmt1P50431 Gm20445-201ENSMUST00000061905 565 ntBASIC14.92□□□□□ -0.02
Shmt1P50431 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shmt1P50431 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Shmt1P50431 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Shmt1P50431 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Shmt1P50431 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Shmt1P50431 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Shmt1P50431 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Shmt1P50431 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.91□□□□□ -0.02
Shmt1P50431 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.91□□□□□ -0.02
Shmt1P50431 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.91□□□□□ -0.02
Shmt1P50431 Gm21854-201ENSMUST00000179901 471 ntBASIC14.91□□□□□ -0.02
Shmt1P50431 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.91□□□□□ -0.02
Shmt1P50431 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shmt1P50431 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Shmt1P50431 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.9□□□□□ -0.02
Shmt1P50431 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shmt1P50431 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Shmt1P50431 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms