Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Ptx3P48759 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ptx3P48759 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ptx3P48759 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ptx3P48759 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ptx3P48759 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ptx3P48759 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptx3P48759 Syt7-205ENSMUST00000224135 1557 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptx3P48759 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ptx3P48759 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptx3P48759 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Gm12585-201ENSMUST00000117307 290 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Gm15957-201ENSMUST00000118893 974 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Gm15321-201ENSMUST00000121290 288 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ptx3P48759 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.15□□□□□ -0.3
Ptx3P48759 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ptx3P48759 Gm29667-201ENSMUST00000190817 490 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Gm44855-201ENSMUST00000205725 362 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Gm2423-201ENSMUST00000074863 733 ntBASIC13.15□□□□□ -0.3
Ptx3P48759 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
Ptx3P48759 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.15□□□□□ -0.3
Ptx3P48759 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ptx3P48759 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.15□□□□□ -0.3
Ptx3P48759 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ptx3P48759 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Ptx3P48759 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ptx3P48759 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ptx3P48759 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ptx3P48759 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Ptx3P48759 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.14□□□□□ -0.31
Ptx3P48759 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.14□□□□□ -0.31
Ptx3P48759 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ptx3P48759 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ptx3P48759 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Gm15393-201ENSMUST00000120499 219 ntBASIC13.14□□□□□ -0.31
Ptx3P48759 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.14□□□□□ -0.31
Ptx3P48759 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.14□□□□□ -0.31
Ptx3P48759 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ptx3P48759 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.14□□□□□ -0.31
Ptx3P48759 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ptx3P48759 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.13□□□□□ -0.31
Ptx3P48759 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.13□□□□□ -0.31
Ptx3P48759 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms