Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm7729-201ENSMUST00000050143 801 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Xcl1P47993 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Xcl1P47993 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.15□□□□□ -0.95
Xcl1P47993 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Xcl1P47993 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Xcl1P47993 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Xcl1P47993 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC9.14□□□□□ -0.95
Xcl1P47993 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC9.14□□□□□ -0.95
Xcl1P47993 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC9.14□□□□□ -0.95
Xcl1P47993 Gm8584-201ENSMUST00000171982 758 ntBASIC9.14□□□□□ -0.95
Xcl1P47993 AC099934.2-201ENSMUST00000196389 70 ntBASIC9.14□□□□□ -0.95
Xcl1P47993 AC156953.1-201ENSMUST00000196953 70 ntBASIC9.14□□□□□ -0.95
Xcl1P47993 AC157822.2-201ENSMUST00000200291 70 ntBASIC9.14□□□□□ -0.95
Xcl1P47993 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC9.14□□□□□ -0.95
Xcl1P47993 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Xcl1P47993 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Xcl1P47993 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.14□□□□□ -0.95
Xcl1P47993 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.14□□□□□ -0.95
Xcl1P47993 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.14□□□□□ -0.95
Xcl1P47993 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Xcl1P47993 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Xcl1P47993 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Xcl1P47993 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.13□□□□□ -0.95
Xcl1P47993 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm38102-201ENSMUST00000192791 1935 ntBASIC9.13□□□□□ -0.95
Xcl1P47993 Gm45630-201ENSMUST00000210243 1911 ntBASIC9.13□□□□□ -0.95
Xcl1P47993 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.13□□□□□ -0.95
Xcl1P47993 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Xcl1P47993 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Xcl1P47993 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC9.13□□□□□ -0.95
Xcl1P47993 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC9.13□□□□□ -0.95
Xcl1P47993 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Xcl1P47993 Gm43767-201ENSMUST00000198933 381 ntBASIC9.13□□□□□ -0.95
Xcl1P47993 Gm44430-201ENSMUST00000203376 995 ntBASIC9.13□□□□□ -0.95
Xcl1P47993 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms