Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.82□□□□□ -0.2
Gli1P47806 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gli1P47806 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gli1P47806 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Gli1P47806 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gli1P47806 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Gli1P47806 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.81□□□□□ -0.2
Gli1P47806 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Gli1P47806 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.81□□□□□ -0.2
Gli1P47806 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.81□□□□□ -0.2
Gli1P47806 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.81□□□□□ -0.2
Gli1P47806 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Gli1P47806 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Thap2-203ENSMUST00000218989 527 ntBASIC13.81□□□□□ -0.2
Gli1P47806 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gli1P47806 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.81□□□□□ -0.2
Gli1P47806 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gli1P47806 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.81□□□□□ -0.2
Gli1P47806 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Gli1P47806 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gli1P47806 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Gli1P47806 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Gli1P47806 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Gm13464-201ENSMUST00000119418 935 ntBASIC13.8□□□□□ -0.2
Gli1P47806 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.8□□□□□ -0.2
Gli1P47806 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Gm18889-201ENSMUST00000174284 929 ntBASIC13.8□□□□□ -0.2
Gli1P47806 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.8□□□□□ -0.2
Gli1P47806 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gli1P47806 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Gli1P47806 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gli1P47806 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.79□□□□□ -0.2
Gli1P47806 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms