Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmx3P42581 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmx3P42581 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmx3P42581 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.86□□□□□ -0.51
Hmx3P42581 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.86□□□□□ -0.51
Hmx3P42581 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmx3P42581 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hmx3P42581 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.85□□□□□ -0.51
Hmx3P42581 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.85□□□□□ -0.51
Hmx3P42581 Gm18041-201ENSMUST00000218210 618 ntBASIC11.85□□□□□ -0.51
Hmx3P42581 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hmx3P42581 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.85□□□□□ -0.51
Hmx3P42581 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmx3P42581 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.84□□□□□ -0.51
Hmx3P42581 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Gm7153-201ENSMUST00000117092 455 ntBASIC11.84□□□□□ -0.51
Hmx3P42581 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.84□□□□□ -0.51
Hmx3P42581 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Hmx3P42581 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hmx3P42581 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hmx3P42581 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Hmx3P42581 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Hmx3P42581 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hmx3P42581 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmx3P42581 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmx3P42581 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Hmx3P42581 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmx3P42581 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmx3P42581 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmx3P42581 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmx3P42581 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmx3P42581 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms