Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm15653-201ENSMUST00000119247 907 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Gm12151-201ENSMUST00000121374 290 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Gm14767-201ENSMUST00000121559 586 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Gm44872-201ENSMUST00000207864 420 ntBASIC11.33□□□□□ -0.6
Cd27P41272 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.33□□□□□ -0.6
Cd27P41272 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.33□□□□□ -0.6
Cd27P41272 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cd27P41272 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.33□□□□□ -0.6
Cd27P41272 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cd27P41272 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.33□□□□□ -0.6
Cd27P41272 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cd27P41272 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Cd27P41272 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.32□□□□□ -0.6
Cd27P41272 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.32□□□□□ -0.6
Cd27P41272 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.32□□□□□ -0.6
Cd27P41272 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cd27P41272 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cd27P41272 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cd27P41272 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cd27P41272 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.31□□□□□ -0.6
Cd27P41272 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Cd27P41272 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.31□□□□□ -0.6
Cd27P41272 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.31□□□□□ -0.6
Cd27P41272 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Gm9229-201ENSMUST00000222777 126 ntBASIC11.31□□□□□ -0.6
Cd27P41272 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cd27P41272 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cd27P41272 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms