Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cd9P40240 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.92□□□□□ -0.18
Cd9P40240 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.92□□□□□ -0.18
Cd9P40240 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Gm15460-201ENSMUST00000118147 391 ntBASIC13.92□□□□□ -0.18
Cd9P40240 Mir1897-201ENSMUST00000122581 272 ntBASIC13.92□□□□□ -0.18
Cd9P40240 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cd9P40240 Gm25948-201ENSMUST00000175334 112 ntBASIC13.92□□□□□ -0.18
Cd9P40240 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.92□□□□□ -0.18
Cd9P40240 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Cd9P40240 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cd9P40240 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd9P40240 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Gm14701-201ENSMUST00000117156 348 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Gm8410-201ENSMUST00000117225 605 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Gm27321-201ENSMUST00000185021 205 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.91□□□□□ -0.18
Cd9P40240 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.91□□□□□ -0.18
Cd9P40240 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cd9P40240 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cd9P40240 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.9□□□□□ -0.18
Cd9P40240 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cd9P40240 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cd9P40240 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cd9P40240 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.9□□□□□ -0.18
Cd9P40240 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cd9P40240 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Cd9P40240 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Cd9P40240 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cd9P40240 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cd9P40240 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.9□□□□□ -0.18
Cd9P40240 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cd9P40240 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.19
Cd9P40240 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cd9P40240 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cd9P40240 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.89□□□□□ -0.19
Cd9P40240 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd9P40240 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms