Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm43133-201ENSMUST00000197472 463 ntBASIC14.44□□□□□ -0.1
Cxcl12P40224 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm45865-201ENSMUST00000211815 945 ntBASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm10268-201ENSMUST00000085340 555 ntBASIC14.44□□□□□ -0.1
Cxcl12P40224 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cxcl12P40224 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl12P40224 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl12P40224 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm11793-201ENSMUST00000120433 981 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm27320-201ENSMUST00000184892 109 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Olfr284-202ENSMUST00000206647 966 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm5161-201ENSMUST00000075243 853 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Snora73a-201ENSMUST00000082453 205 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.43□□□□□ -0.1
Cxcl12P40224 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cxcl12P40224 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl12P40224 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.42□□□□□ -0.1
Cxcl12P40224 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cxcl12P40224 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.42□□□□□ -0.1
Cxcl12P40224 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.42□□□□□ -0.1
Cxcl12P40224 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.42□□□□□ -0.1
Cxcl12P40224 Itm2b-204ENSMUST00000228637 783 ntBASIC14.42□□□□□ -0.1
Cxcl12P40224 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.42□□□□□ -0.1
Cxcl12P40224 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms