Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.41□□□□□ -0.42
Upk2P38575 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Gm5312-201ENSMUST00000203728 547 ntBASIC12.41□□□□□ -0.42
Upk2P38575 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Upk2P38575 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.41□□□□□ -0.42
Upk2P38575 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.41□□□□□ -0.42
Upk2P38575 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk2P38575 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Upk2P38575 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.4□□□□□ -0.42
Upk2P38575 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Upk2P38575 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Upk2P38575 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Upk2P38575 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Upk2P38575 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.4□□□□□ -0.42
Upk2P38575 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.4□□□□□ -0.42
Upk2P38575 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.4□□□□□ -0.42
Upk2P38575 Gm37935-201ENSMUST00000192012 982 ntBASIC12.4□□□□□ -0.42
Upk2P38575 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.4□□□□□ -0.42
Upk2P38575 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Upk2P38575 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Upk2P38575 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.4□□□□□ -0.43
Upk2P38575 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk2P38575 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Upk2P38575 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk2P38575 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Upk2P38575 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Upk2P38575 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Mir449b-201ENSMUST00000104833 80 ntBASIC12.39□□□□□ -0.43
Upk2P38575 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Upk2P38575 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.39□□□□□ -0.43
Upk2P38575 Gm7774-201ENSMUST00000200064 533 ntBASIC12.39□□□□□ -0.43
Upk2P38575 Gm5779-201ENSMUST00000218467 910 ntBASIC12.39□□□□□ -0.43
Upk2P38575 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Upk2P38575 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Upk2P38575 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms