Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Thbs1P35441 Gm9824-201ENSMUST00000178707 561 ntBASIC13.08□□□□□ -0.32
Thbs1P35441 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.08□□□□□ -0.32
Thbs1P35441 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.08□□□□□ -0.32
Thbs1P35441 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.08□□□□□ -0.32
Thbs1P35441 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thbs1P35441 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Thbs1P35441 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.07□□□□□ -0.32
Thbs1P35441 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.07□□□□□ -0.32
Thbs1P35441 Gm13015-201ENSMUST00000118674 204 ntBASIC13.07□□□□□ -0.32
Thbs1P35441 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.07□□□□□ -0.32
Thbs1P35441 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Mir6990-201ENSMUST00000183724 91 ntBASIC13.07□□□□□ -0.32
Thbs1P35441 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.07□□□□□ -0.32
Thbs1P35441 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Thbs1P35441 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.07□□□□□ -0.32
Thbs1P35441 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Thbs1P35441 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thbs1P35441 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Thbs1P35441 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Thbs1P35441 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Thbs1P35441 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Thbs1P35441 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.06□□□□□ -0.32
Thbs1P35441 Gm13823-201ENSMUST00000119930 345 ntBASIC13.06□□□□□ -0.32
Thbs1P35441 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.06□□□□□ -0.32
Thbs1P35441 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Thbs1P35441 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.06□□□□□ -0.32
Thbs1P35441 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thbs1P35441 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thbs1P35441 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.06□□□□□ -0.32
Thbs1P35441 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.06□□□□□ -0.32
Thbs1P35441 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.06□□□□□ -0.32
Thbs1P35441 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.06□□□□□ -0.32
Thbs1P35441 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Thbs1P35441 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.06□□□□□ -0.32
Thbs1P35441 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thbs1P35441 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thbs1P35441 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.06□□□□□ -0.32
Thbs1P35441 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thbs1P35441 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms