Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.47□□□□□ -0.41
Cd28P31041 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Cd28P31041 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Cd28P31041 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Cd28P31041 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cd28P31041 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.46□□□□□ -0.41
Cd28P31041 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.46□□□□□ -0.41
Cd28P31041 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cd28P31041 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cd28P31041 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.46□□□□□ -0.41
Cd28P31041 Gm4899-201ENSMUST00000178708 719 ntBASIC12.46□□□□□ -0.41
Cd28P31041 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cd28P31041 Mir7071-201ENSMUST00000184847 69 ntBASIC12.46□□□□□ -0.41
Cd28P31041 Gm18669-201ENSMUST00000216049 778 ntBASIC12.46□□□□□ -0.41
Cd28P31041 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cd28P31041 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Cd28P31041 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Cd28P31041 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.46□□□□□ -0.42
Cd28P31041 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.46□□□□□ -0.42
Cd28P31041 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cd28P31041 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.46□□□□□ -0.42
Cd28P31041 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cd28P31041 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.46□□□□□ -0.42
Cd28P31041 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cd28P31041 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.45□□□□□ -0.42
Cd28P31041 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd28P31041 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.45□□□□□ -0.42
Cd28P31041 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd28P31041 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Cd28P31041 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cd28P31041 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.45□□□□□ -0.42
Cd28P31041 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.45□□□□□ -0.42
Cd28P31041 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.45□□□□□ -0.42
Cd28P31041 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.45□□□□□ -0.42
Cd28P31041 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cd28P31041 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd28P31041 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.44□□□□□ -0.42
Cd28P31041 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms