Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cd40lgP27548 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Gm22175-201ENSMUST00000175007 78 ntBASIC13.07□□□□□ -0.32
Cd40lgP27548 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.07□□□□□ -0.32
Cd40lgP27548 Gm2451-201ENSMUST00000199447 999 ntBASIC13.07□□□□□ -0.32
Cd40lgP27548 Gm10290-201ENSMUST00000200451 999 ntBASIC13.07□□□□□ -0.32
Cd40lgP27548 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.07□□□□□ -0.32
Cd40lgP27548 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cd40lgP27548 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.07□□□□□ -0.32
Cd40lgP27548 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.06□□□□□ -0.32
Cd40lgP27548 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.06□□□□□ -0.32
Cd40lgP27548 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.06□□□□□ -0.32
Cd40lgP27548 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cd40lgP27548 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Gm5779-201ENSMUST00000218467 910 ntBASIC13.06□□□□□ -0.32
Cd40lgP27548 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.06□□□□□ -0.32
Cd40lgP27548 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.06□□□□□ -0.32
Cd40lgP27548 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.06□□□□□ -0.32
Cd40lgP27548 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cd40lgP27548 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cd40lgP27548 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.05□□□□□ -0.32
Cd40lgP27548 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cd40lgP27548 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cd40lgP27548 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cd40lgP27548 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.05□□□□□ -0.32
Cd40lgP27548 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.05□□□□□ -0.32
Cd40lgP27548 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.05□□□□□ -0.32
Cd40lgP27548 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.05□□□□□ -0.32
Cd40lgP27548 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cd40lgP27548 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.05□□□□□ -0.32
Cd40lgP27548 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cd40lgP27548 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms